Transcript: ENSSSCT00000009414.5 MATN3-201

Description

matrilin 3 [Source:VGNC Symbol;Acc:VGNC:90044]

Location

About this transcript

This transcript has 9 exons, is annotated with 44 domains and features and is associated with 1349 variant alleles.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000009414.5	MATN3-201	1464	487aa	ENSSSCP00000009174.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1SCU3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSSSCT00000071410.2	MATN3-202	1338	445aa	ENSSSCP00000068346.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QTT2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,464 bps, Translation length: 487 residues

Version

ENSSSCT00000009414.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Frameshift introns

Frameshift introns occur at intron number(s) 1.