Transcript: ENSSSCT00000006323.5 COL5A1-201

Description

collagen type V alpha 1 chain [Source:NCBI gene (formerly Entrezgene);Acc:397533]

Location

About this transcript

This transcript has 65 exons, is annotated with 53 domains and features, is associated with 4864 variant alleles and maps to 46 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000006323.5	COL5A1-201	7960	1918aa	ENSSSCP00000006161.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1S021	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 65, Coding exons: 65, Transcript length: 7,960 bps, Translation length: 1,918 residues

Version

ENSSSCT00000006323.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Frameshift introns

Frameshift introns occur at intron number(s) 44, 61.