Transcript: ENSSSCT00000004039.4 SF3A3-202

Description

splicing factor 3a subunit 3 [Source:VGNC Symbol;Acc:VGNC:92770]

Location

About this transcript

This transcript has 17 exons, is annotated with 11 domains and features, is associated with 661 variant alleles and maps to 8 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000004039.4	SF3A3-202	1907	501aa	ENSSSCP00000003948.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VWI8 F1SV40	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000068686.1	SF3A3-201	1718	495aa	ENSSSCP00000067812.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VVS7 A0A5G2QSK9	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Summary

Statistics

Exons: 17, Coding exons: 17, Transcript length: 1,907 bps, Translation length: 501 residues

Version

ENSSSCT00000004039.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.