Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: ENSSSCT00000087947.2

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Description

frataxin [Source:VGNC Symbol;Acc:VGNC:88273]

Location

Primary_assembly 1: 222,412,509-222,435,125 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 22 domains and features, is associated with 1341 variant alleles and maps to 19 oligo probes.

Gene

This transcript is a product of gene ENSSSCG00000032999.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000087947.2	-	2704	264aa	ENSSSCP00000068908.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R3Z0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000071766.2	-	813	182aa	ENSSSCP00000059918.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BA09 A0A4X1W4H8	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Protein summary

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Protein domains for ENSSSCP00000068908.1

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