Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: ENSSSCT00000067293.2 CAPN1-202

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Description

calpain 1 [Source:VGNC Symbol;Acc:VGNC:86170]

Location

Primary_assembly 2: 6,998,977-7,022,502 reverse strand.

About this transcript

This transcript has 18 exons, is annotated with 29 domains and features and is associated with 1677 variant alleles.

Gene

This transcript is a product of gene ENSSSCG00000012999.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000014210.5	CAPN1-203	2596	775aa	ENSSSCP00000013824.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S6GBZ7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000059315.3	CAPN1-201	2650	653aa	ENSSSCP00000033221.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S6H4P7	-
ENSSSCT00000067293.2	CAPN1-202	2641	650aa	ENSSSCP00000067028.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1UXC1 Q9N0M7	-

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Protein summary

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Protein domains for ENSSSCP00000067028.2

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