Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: ENSSSCT00000060487.3 GPC1-202

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Description

glypican 1 [Source:VGNC Symbol;Acc:VGNC:96329]

Location

Primary_assembly 15: 139,457,669-139,484,669 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 13 domains and features, is associated with 936 variant alleles and maps to 12 oligo probes.

Gene

This transcript is a product of gene ENSSSCG00000016364.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000060487.3	GPC1-202	3198	559aa	ENSSSCP00000047245.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287ATH4 A0A8D1F7W9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000017819.3	GPC1-201	3341	552aa	ENSSSCP00000017338.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1WUM4 F1SIQ5	-

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Protein summary

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Protein domains for ENSSSCP00000047245.1

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