Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
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External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
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Transcript: ENSSSCT00000054934.3 LMO7-204

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Description

LIM domain 7 [Source:VGNC Symbol;Acc:VGNC:89767]

Location

Primary_assembly 11: 48,072,159-48,133,445 forward strand.

About this transcript

This transcript has 27 exons, is annotated with 47 domains and features and is associated with 2297 variant alleles.

Gene

This transcript is a product of gene ENSSSCG00000040184.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000054934.3	LMO7-204	5771	1551aa	ENSSSCP00000042648.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AFH8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000065846.3	LMO7-206	6933	1525aa	ENSSSCP00000037854.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A1Q6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000041124.3	LMO7-205	5021	1378aa	ENSSSCP00000035575.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZVE6	-
ENSSSCT00000061055.3	LMO7-203	4976	1525aa	ENSSSCP00000058335.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BPH6	-
ENSSSCT00000023080.4	LMO7-202	4690	1257aa	ENSSSCP00000026621.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3LR88	-
ENSSSCT00000048570.3	LMO7-201	3973	1257aa	ENSSSCP00000043631.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AI09	-

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Protein summary

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Protein domains for ENSSSCP00000042648.3

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