ras homolog family member T1 [Source:VGNC Symbol;Acc:VGNC:92293]
Primary_assembly 12: 42,711,234-42,783,341 reverse strand.
This transcript has 22 exons, is annotated with 30 domains and features, is associated with 3357 variant alleles and maps to 12 oligo probes.
This transcript is a product of gene ENSSSCG00000017735.5 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| ENSSSCT00000036939.3 | RHOT1-205 | 3342 | 752aa | ENSSSCP00000037756.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287A1F4 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000082888.1 | RHOT1-203 | 5566 | 580aa | ENSSSCP00000069211.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A5G2QWH3 A0A8D1W040 | - |
| ENSSSCT00000094656.1 | RHOT1-202 | 5268 | 532aa | ENSSSCP00000079847.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8W4FKW7 | - |
| ENSSSCT00000085989.1 | RHOT1-201 | 4238 | 551aa | ENSSSCP00000071323.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A5G2R4R0 | - |
| ENSSSCT00000056201.3 | RHOT1-206 | 3246 | 720aa | ENSSSCP00000035944.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A286ZWW1 A0A8D0SRI1 | - |
| ENSSSCT00000087981.2 | RHOT1-208 | 3214 | 704aa | ENSSSCP00000063995.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A5G2R0F8 A0A8D0XMP4 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| ENSSSCT00000081459.2 | RHOT1-207 | 3201 | 705aa | ENSSSCP00000068384.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A5G2RCK8 | - |
| ENSSSCT00000045634.3 | RHOT1-209 | 3093 | 663aa | ENSSSCP00000034247.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A286ZRP2 A0A8D1ZHE5 | APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1, |
| ENSSSCT00000052850.3 | RHOT1-210 | 3059 | 631aa | ENSSSCP00000038352.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287A323 A0A8D1DHE1 | APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1, |
| ENSSSCT00000019302.4 | RHOT1-204 | 2036 | 599aa | ENSSSCP00000018790.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A4X1TEC3 F1RKW4 | - |