Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: ENSSSCT00000056443.3 HOMER1-203

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Description

homer scaffold protein 1 [Source:VGNC Symbol;Acc:VGNC:88928]

Location

Primary_assembly 2: 88,122,882-88,206,838 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 16 domains and features, is associated with 2351 variant alleles and maps to 12 oligo probes.

Gene

This transcript is a product of gene ENSSSCG00000014113.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000056443.3	HOMER1-203	4024	365aa	ENSSSCP00000033817.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZQD2 A0A8D1CEY2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000057415.2	HOMER1-208	5383	354aa	ENSSSCP00000043946.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AJ82 A0A4X1T413	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000082169.2	HOMER1-209	4993	224aa	ENSSSCP00000063706.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1T257 A0A5G2QIH9	-
ENSSSCT00000073857.2	HOMER1-206	4359	344aa	ENSSSCP00000069959.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RFU4	-
ENSSSCT00000015416.5	HOMER1-202	3970	347aa	ENSSSCP00000015007.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RF45	-
ENSSSCT00000062712.3	HOMER1-204	3964	345aa	ENSSSCP00000037935.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A2F6 A0A4X1T4A0	-
ENSSSCT00000058872.3	HOMER1-201	3895	322aa	ENSSSCP00000032317.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZL34	-
ENSSSCT00000100100.1	HOMER1-207	3469	180aa	ENSSSCP00000078511.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FGZ9	-
ENSSSCT00000066867.2	HOMER1-205	2099	177aa	ENSSSCP00000070497.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R052	-

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Protein summary

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Protein domains for ENSSSCP00000033817.2

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