Transcript: ENSSSCT00000001197.3 SCGN-202

Description

secretagogin, EF-hand calcium binding protein [Source:VGNC Symbol;Acc:VGNC:92624]

Location

About this transcript

This transcript has 11 exons, is annotated with 25 domains and features, is associated with 2120 variant alleles and maps to 12 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000087451.1	SCGN-201	1513	278aa	ENSSSCP00000061584.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QC00 A0A8D1B8K9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000001197.3	SCGN-202	1507	276aa	ENSSSCP00000001171.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q06A97	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Protein summary