Primary_assembly 7: 115,963,459-115,972,092 reverse strand.
Sscrofa11.1:CM000818.5
This gene has 4 transcripts (splice variants), 202 orthologues and 42 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| ENSSSCT00000050065.3 | - | 1494 | 473aa | ENSSSCP00000055888.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287BH21 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| ENSSSCT00000002759.5 | - | 1462 | 463aa | ENSSSCP00000002690.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F1SCD1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000061637.3 | - | 1344 | 423aa | ENSSSCP00000057660.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287BM11 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000053240.3 | - | 1293 | 406aa | ENSSSCP00000050788.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287B2Z5 | - |
