Primary_assembly 4: 88,978,383-88,989,769 reverse strand.
Sscrofa11.1:CM000815.5
This gene has 6 transcripts (splice variants), 245 orthologues and 13 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| ENSSSCT00000069698.2 | - | 1105 | 274aa | ENSSSCP00000073973.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A5G2RG87 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000094146.1 | - | 1055 | 283aa | ENSSSCP00000075959.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8W4F987 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000091846.1 | - | 981 | 267aa | ENSSSCP00000076425.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8W4FDP1 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| ENSSSCT00000099728.1 | - | 903 | 241aa | ENSSSCP00000079228.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8W4FIF6 | - |
| ENSSSCT00000099455.1 | - | 867 | 229aa | ENSSSCP00000080140.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8W4FPA9 | - |
| ENSSSCT00000099676.1 | - | 450 | 149aa | ENSSSCP00000077966.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8W4FGG0 | - |
