Primary_assembly 14: 50,593,932-50,599,802 reverse strand.
Sscrofa11.1:CM000825.5
This gene has 4 transcripts (splice variants), 133 orthologues and 20 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| ENSSSCT00000092228.1 | - | 3051 | 462aa | ENSSSCP00000075851.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8D1UNH9 A0A8W4F953 | - |
| ENSSSCT00000059273.3 | - | 1488 | 469aa | ENSSSCP00000041320.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8X9AEM1 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| ENSSSCT00000011060.4 | - | 1446 | 455aa | ENSSSCP00000010772.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A288CFV7 A0A8D0MNN7 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000024939.4 | - | 1410 | 469aa | ENSSSCP00000022196.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8D0MQK1 I3LDR2 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
