Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TPT1 ENSSSCG00000040929

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Description

tumor protein, translationally-controlled 1 [Source:NCBI gene (formerly Entrezgene);Acc:397664]

Gene Synonyms

TCTP

Location

Primary_assembly 11: 21,929,221-21,932,691 forward strand.

Sscrofa11.1:CM000822.5

About this gene

This gene has 2 transcripts (splice variants), 215 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000052862.3	TPT1-201	903	245aa	ENSSSCP00000051362.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B4E6 A0A4X1SDW4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000087705.2	TPT1-202	810	214aa	ENSSSCP00000061608.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QHY7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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