Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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Ontologies
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Genetic Variation
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Gene: KNTC1 ENSSSCG00000039546

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Description

kinetochore associated 1 [Source:VGNC Symbol;Acc:VGNC:89559]

Location

Primary_assembly 14: 30,153,702-30,241,829 reverse strand.

Sscrofa11.1:CM000825.5

About this gene

This gene has 2 transcripts (splice variants) and 193 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000040855.3	KNTC1-201	8959	2230aa	ENSSSCP00000046644.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287ARE8 A0A4X1UFF4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000055619.3	KNTC1-202	8920	2207aa	ENSSSCP00000045290.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AML8 A0A4X1UEQ9	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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