Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CSPG5 ENSSSCG00000039224

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Description

chondroitin sulfate proteoglycan 5 [Source:VGNC Symbol;Acc:VGNC:87044]

Location

Primary_assembly 13: 30,387,224-30,411,850 reverse strand.

Sscrofa11.1:CM000824.5

About this gene

This gene has 3 transcripts (splice variants) and 238 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000051770.2	CSPG5-201	2164	538aa	ENSSSCP00000043854.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AIY6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000041596.3	CSPG5-203	5879	512aa	ENSSSCP00000042557.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AFE2 A0A8D1ER53	-
ENSSSCT00000058792.2	CSPG5-202	2112	476aa	ENSSSCP00000049417.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AZ29	-

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Summary

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