Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CBX5 ENSSSCG00000039191

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Description

chromobox 5 [Source:VGNC Symbol;Acc:VGNC:86232]

Location

Primary_assembly 5: 19,446,086-19,484,463 reverse strand.

Sscrofa11.1:CM000816.5

About this gene

This gene has 2 transcripts (splice variants), 203 orthologues and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000059441.2	CBX5-202	5247	191aa	ENSSSCP00000043068.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1WBS6 F2Z5T3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000060765.3	CBX5-201	8830	185aa	ENSSSCP00000045786.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287APB8 A0A8D1UNK9	-

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Summary

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