Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: P4HB ENSSSCG00000039148

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Description

prolyl 4-hydroxylase subunit beta [Source:VGNC Symbol;Acc:VGNC:91135]

Location

Primary_assembly 12: 1,121,824-1,131,289 forward strand.

Sscrofa11.1:CM000823.5

About this gene

This gene has 9 transcripts (splice variants), 222 orthologues and 13 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000091643.2	P4HB-203	1991	622aa	ENSSSCP00000068719.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RDD7 A0A8D1ILU6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000037157.3	P4HB-205	2348	508aa	ENSSSCP00000039090.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1UBN3 G9F6X8	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000095056.1	P4HB-206	2306	494aa	ENSSSCP00000077194.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FCR6	-
ENSSSCT00000105905.1	P4HB-207	2182	448aa	ENSSSCP00000075714.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FA53	-
ENSSSCT00000097694.1	P4HB-208	2180	452aa	ENSSSCP00000075908.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4F940	-
ENSSSCT00000051214.3	P4HB-209	2174	450aa	ENSSSCP00000046155.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AQH8	-
ENSSSCT00000092109.1	P4HB-202	2045	425aa	ENSSSCP00000076704.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FBK6	-
ENSSSCT00000084770.2	P4HB-204	1664	490aa	ENSSSCP00000066338.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QN66 A0A8D1UEK8	-
ENSSSCT00000093972.1	P4HB-201	1452	465aa	ENSSSCP00000076585.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FE48	-

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Summary

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