Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CRNKL1 ENSSSCG00000038587

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Description

crooked neck pre-mRNA splicing factor 1 [Source:VGNC Symbol;Acc:VGNC:95654]

Location

Primary_assembly 17: 28,077,707-28,111,558 reverse strand.

Sscrofa11.1:CM000828.5

About this gene

This gene has 5 transcripts (splice variants), 217 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000041114.3	CRNKL1-202	3168	690aa	ENSSSCP00000043561.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AHU4 A0A8D0WXZ0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000067244.2	CRNKL1-204	6217	682aa	ENSSSCP00000070590.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RH23	-
ENSSSCT00000074625.1	CRNKL1-203	6062	687aa	ENSSSCP00000060586.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QEY2 A0A8D0WVG2	-
ENSSSCT00000028905.4	CRNKL1-205	6052	627aa	ENSSSCP00000020449.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3L8T8	-
ENSSSCT00000051367.3	CRNKL1-201	2718	659aa	ENSSSCP00000042325.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AE82 A0A8D1SXW3	-

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Summary

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