Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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Gene: CIART ENSSSCG00000038374

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Description

circadian associated repressor of transcription [Source:VGNC Symbol;Acc:VGNC:86694]

Location

Primary_assembly 4: 98,800,931-98,804,739 reverse strand.

Sscrofa11.1:CM000815.5

About this gene

This gene has 2 transcripts (splice variants) and 216 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000007292.5	CIART-201	1620	453aa	ENSSSCP00000007097.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0SUG2 F1SS75	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000060285.3	CIART-202	1341	414aa	ENSSSCP00000050673.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B3H5 A0A8D0MAD6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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