Primary_assembly 6: 61,816,638-61,828,872 forward strand.
Sscrofa11.1:CM000817.5
This gene has 5 transcripts (splice variants), 162 orthologues and 35 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| ENSSSCT00000076382.1 | - | 4334 | 601aa | ENSSSCP00000073861.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A480V1U2 A0A8D1YLD4 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| ENSSSCT00000039668.2 | - | 3319 | 597aa | ENSSSCP00000042866.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A481AMI3 A0A8D0Q1E6 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000052392.3 | - | 2724 | 594aa | ENSSSCP00000039227.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287A641 A0A8D1V6L8 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000050968.3 | - | 2066 | 551aa | ENSSSCP00000035853.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A286ZWM4 A0A8D0K1Y5 | - |
| ENSSSCT00000080677.1 | - | 434 | 65aa | ENSSSCP00000069483.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A4X1ST29 A0A5G2QZB9 | - |
