Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: COL6A6 ENSSSCG00000037430

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Description

collagen type VI alpha 6 chain [Source:VGNC Symbol;Acc:VGNC:108644]

Location

Primary_assembly 13: 1,817,406-1,985,799 reverse strand.

Sscrofa11.1:CM000824.5

About this gene

This gene has 2 transcripts (splice variants), 276 orthologues and 13 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000070934.2	COL6A6-201	8438	2158aa	ENSSSCP00000070825.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R0Y2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000053187.3	COL6A6-202	8096	2044aa	ENSSSCP00000037369.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A0A6	-

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Summary

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