Primary_assembly 3: 57,262,468-57,321,337 forward strand.
Sscrofa11.1:CM000814.5
This gene has 3 transcripts (splice variants), 101 orthologues and 36 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| ENSSSCT00000008984.6 | - | 873 | 226aa | ENSSSCP00000008758.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F1STC5 | APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| ENSSSCT00000037353.3 | - | 861 | 222aa | ENSSSCP00000038998.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287A4Y3 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000049445.2 | - | 740 | 148aa | ENSSSCP00000042222.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287AE24 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
