Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: COL1A1 ENSSSCG00000036135

.

Description

collagen type I alpha 1 chain [Source:VGNC Symbol;Acc:VGNC:86870]

Location

Primary_assembly 12: 26,379,090-26,397,004 reverse strand.

Sscrofa11.1:CM000823.5

About this gene

This gene has 3 transcripts (splice variants), 252 orthologues and 36 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000061988.2	COL1A1-203	5754	1466aa	ENSSSCP00000037874.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A1S6 A0A8D1Z2N0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000073214.2	COL1A1-202	4701	1451aa	ENSSSCP00000066291.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QQE9 A0A8D0MXF3	-
ENSSSCT00000040712.3	COL1A1-201	4047	1348aa	ENSSSCP00000057325.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BLD2	-

.

Summary

.

.