Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PAX5 ENSSSCG00000036086

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Description

paired box 5 [Source:VGNC Symbol;Acc:VGNC:91194]

Location

Primary_assembly 1: 237,575,061-237,785,413 reverse strand.

Sscrofa11.1:CM000812.5

About this gene

This gene has 4 transcripts (splice variants), 198 orthologues and 44 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000088364.2	PAX5-202	1465	362aa	ENSSSCP00000066660.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BBZ4 A0A4X1VJ56	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000059450.3	PAX5-201	8183	283aa	ENSSSCP00000039851.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A7R2	-
ENSSSCT00000066563.1	PAX5-203	1363	328aa	ENSSSCP00000071131.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VGN5 A0A5G2R1S3	-
ENSSSCT00000084623.1	PAX5-204	1264	296aa	ENSSSCP00000063446.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VH95 A0A5G2QHT5	-

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Summary

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