Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: AP1S2 ENSSSCG00000036074

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Description

adaptor related protein complex 1 subunit sigma 2 [Source:VGNC Symbol;Acc:VGNC:85382]

Location

Primary_assembly X: 12,367,795-12,397,677 reverse strand.

Sscrofa11.1:CM000830.5

About this gene

This gene has 3 transcripts (splice variants), 288 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000068080.2	AP1S2-203	1617	160aa	ENSSSCP00000070550.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1UX87 A0A5G2RGZ5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000065448.3	AP1S2-201	3549	149aa	ENSSSCP00000053766.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BBP6	-
ENSSSCT00000081951.2	AP1S2-202	2164	157aa	ENSSSCP00000072693.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1UYB3 A0A5G2R8Q1	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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