Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CNEP1R1 ENSSSCG00000036005

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Description

CTD nuclear envelope phosphatase 1 regulatory subunit 1 [Source:VGNC Symbol;Acc:VGNC:86813]

Location

Primary_assembly 6: 34,775,446-34,788,252 reverse strand.

Sscrofa11.1:CM000817.5

About this gene

This gene has 2 transcripts (splice variants) and 213 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000053815.3	CNEP1R1-202	1789	131aa	ENSSSCP00000053511.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BAE1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000080851.2	CNEP1R1-201	1527	125aa	ENSSSCP00000061261.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A480MBN4 A0A4X1TXY0	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Summary

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