Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: LSM6 ENSSSCG00000035973

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Description

LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:VGNC Symbol;Acc:VGNC:89875]

Location

Primary_assembly 8: 82,409,174-82,428,426 reverse strand.

Sscrofa11.1:CM000819.5

About this gene

This gene has 2 transcripts (splice variants), 222 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000040426.2	LSM6-201	4472	124aa	ENSSSCP00000032187.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZKR5 A0A4X1VI63	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000096685.1	LSM6-202	4511	80aa	ENSSSCP00000078463.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FJI1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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