Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: OS9 ENSSSCG00000035875

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Description

OS9 endoplasmic reticulum lectin [Source:VGNC Symbol;Acc:VGNC:91065]

Location

Primary_assembly 5: 22,957,875-23,004,458 forward strand.

Sscrofa11.1:CM000816.5

About this gene

This gene has 5 transcripts (splice variants), 189 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000058534.3	OS9-205	2720	665aa	ENSSSCP00000040349.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A8P0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000077266.2	OS9-202	2531	611aa	ENSSSCP00000068294.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RCD3	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000077691.2	OS9-203	2432	578aa	ENSSSCP00000067428.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QZQ4	-
ENSSSCT00000074495.2	OS9-201	2271	536aa	ENSSSCP00000063954.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QHT8	-
ENSSSCT00000088678.2	OS9-204	1910	404aa	ENSSSCP00000062547.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QKF9	-

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Summary

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