Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ATP8A2 ENSSSCG00000035421

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Description

ATPase phospholipid transporting 8A2 [Source:HGNC Symbol;Acc:HGNC:13533]

Location

Primary_assembly 11: 3,277,951-3,793,881 forward strand.

Sscrofa11.1:CM000822.5

About this gene

This gene has 3 transcripts (splice variants), 211 orthologues and 17 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000052770.3	ATP8A2-202	8687	1188aa	ENSSSCP00000042799.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AFK3 A0A4X1TTM0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000096737.1	ATP8A2-203	8612	1163aa	ENSSSCP00000076251.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FA35	-
ENSSSCT00000063748.3	ATP8A2-201	8533	1148aa	ENSSSCP00000040750.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZR96 A0A4X1TYL0	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Summary

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