Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CXCL12 ENSSSCG00000034973

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Description

C-X-C motif chemokine ligand 12 [Source:VGNC Symbol;Acc:VGNC:87103]

Location

Primary_assembly 14: 91,516,431-91,552,752 forward strand.

Sscrofa11.1:CM000825.5

About this gene

This gene has 3 transcripts (splice variants) and 266 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000077148.2	CXCL12-202	6120	119aa	ENSSSCP00000066937.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QQD0 A0A8D0V261	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000046183.3	CXCL12-203	4455	116aa	ENSSSCP00000043828.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VBG4 Q6EKW4	-
ENSSSCT00000011398.6	CXCL12-201	1015	109aa	ENSSSCP00000011103.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1V768 F6Q382	-

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Summary

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