Primary_assembly 2: 810,348-842,241 forward strand.
Sscrofa11.1:CM000813.5
This gene has 5 transcripts (splice variants), 148 orthologues and 21 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| ENSSSCT00000098810.1 | - | 13158 | 4385aa | ENSSSCP00000075721.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8W4FBP7 | APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| ENSSSCT00000100573.1 | - | 13023 | 4340aa | ENSSSCP00000074676.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8W4F689 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000043195.2 | - | 12021 | 4006aa | ENSSSCP00000076442.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8W4FAZ8 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000096515.1 | - | 7020 | 2339aa | ENSSSCP00000075274.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8W4F7Q4 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000093571.1 | - | 4803 | 1601aa | ENSSSCP00000081276.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8W4FPH8 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
