Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ARFGAP1 ENSSSCG00000032235

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Description

ADP ribosylation factor GTPase activating protein 1 [Source:VGNC Symbol;Acc:VGNC:95671]

Location

Primary_assembly 17: 62,380,091-62,391,856 forward strand.

Sscrofa11.1:CM000828.5

About this gene

This gene has 4 transcripts (splice variants), 198 orthologues and 24 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000061928.3	ARFGAP1-204	1707	424aa	ENSSSCP00000031462.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZJ05 A0A4X1SL56	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000039233.3	ARFGAP1-203	1679	416aa	ENSSSCP00000046069.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AQ96 A0A8D0UWY6	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000087960.2	ARFGAP1-202	1445	303aa	ENSSSCP00000071821.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1SL92 A0A5G2R405	-
ENSSSCT00000081416.2	ARFGAP1-201	1411	371aa	ENSSSCP00000071750.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R5Z2 A0A8D1HU28	-

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Summary

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