Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: PRRX1 ENSSSCG00000031503

.

Description

paired related homeobox 1 [Source:VGNC Symbol;Acc:VGNC:91875]

Location

Primary_assembly 4: 80,427,687-80,501,646 reverse strand.

Sscrofa11.1:CM000815.5

About this gene

This gene has 2 transcripts (splice variants), 219 orthologues and 44 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000048464.1	PRRX1-202	4346	245aa	ENSSSCP00000037781.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A1I3 A0A4X1ULQ5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000051141.3	PRRX1-201	4157	217aa	ENSSSCP00000043169.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AGR6 A0A4X1UJR9	-

.

Summary

.

.