Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SCO2 ENSSSCG00000031420

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Description

synthesis of cytochrome C oxidase 2 [Source:VGNC Symbol;Acc:VGNC:107169]

Location

Primary_assembly 5: 220,814-225,307 forward strand.

Sscrofa11.1:CM000816.5

About this gene

This gene has 2 transcripts (splice variants), 164 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000087330.2	SCO2-201	3885	264aa	ENSSSCP00000060462.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AQS7 A0A8D0JSJ5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000065849.3	SCO2-202	3807	264aa	ENSSSCP00000046225.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AQS7 A0A8D0JSJ5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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