Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: POMGNT1 ENSSSCG00000029145

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Description

protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) [Source:VGNC Symbol;Acc:VGNC:98536]

Location

Primary_assembly 6: 165,212,833-165,222,409 forward strand.

Sscrofa11.1:CM000817.5

About this gene

This gene has 5 transcripts (splice variants), 200 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000061107.3	POMGNT1-203	2802	689aa	ENSSSCP00000045060.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AMB9 A0A8D0W5S0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000067755.1	POMGNT1-202	2823	621aa	ENSSSCP00000062614.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QWQ7 A0A8D1JQB0	-
ENSSSCT00000071886.1	POMGNT1-204	2608	622aa	ENSSSCP00000074532.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RDF8 A0A8D1T2D1	-
ENSSSCT00000022714.4	POMGNT1-205	2461	660aa	ENSSSCP00000025649.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1WAD9 F1S3V2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000089448.2	POMGNT1-201	803	200aa	ENSSSCP00000063526.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1W4T8 A0A5G2QI03	-

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Summary

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