Summary
- Splice variants
- Transcript comparison
- Gene alleles
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Gene: RB1CC1 ENSSSCG00000028902

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Description

RB1 inducible coiled-coil 1 [Source:VGNC Symbol;Acc:VGNC:92133]

Location

Primary_assembly 4: 77,594,324-77,649,548 forward strand.

Sscrofa11.1:CM000815.5

About this gene

This gene has 4 transcripts (splice variants) and 217 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000064633.3	RB1CC1-201	5432	1608aa	ENSSSCP00000032179.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZKU3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000055677.3	RB1CC1-204	6540	1594aa	ENSSSCP00000037315.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A0N9	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000104650.1	RB1CC1-202	5426	1606aa	ENSSSCP00000080841.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FMY0	-
ENSSSCT00000026198.4	RB1CC1-203	5371	1591aa	ENSSSCP00000023027.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0MR10 I3LG34	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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