Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: MEF2A ENSSSCG00000028771

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Description

myocyte enhancer factor 2A [Source:NCBI gene (formerly Entrezgene);Acc:100037273]

Location

Primary_assembly 1: 138,341,158-138,511,314 forward strand.

Sscrofa11.1:CM000812.5

About this gene

This gene has 4 transcripts (splice variants), 205 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000028081.4	MEF2A-202	5661	507aa	ENSSSCP00000026217.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1UE42 I3LQ39	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000065681.2	MEF2A-204	5993	497aa	ENSSSCP00000033646.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZPW5 A0A4X1UJE4	-
ENSSSCT00000023102.4	MEF2A-201	5695	499aa	ENSSSCP00000023801.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0PXF7 I3LIA0	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000059700.3	MEF2A-203	5016	437aa	ENSSSCP00000041379.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287ABJ7 A0A4X1UJ14	-

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Summary

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