Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ENSSSCG00000028485

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Description

Y-box binding protein 1 [Source:VGNC Symbol;Acc:VGNC:98681]

Location

Primary_assembly 6: 168,716,774-168,736,604 reverse strand.

Sscrofa11.1:CM000817.5

About this gene

This gene has 6 transcripts (splice variants), 196 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000104315.1	-	2046	537aa	ENSSSCP00000081314.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FPA2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000088629.2	-	1682	419aa	ENSSSCP00000069026.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QVX8 A0A8D1VRH0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000026666.3	-	1667	409aa	ENSSSCP00000022947.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3LFV4	-
ENSSSCT00000055234.2	-	1577	340aa	ENSSSCP00000049359.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AZS5	-
ENSSSCT00000046393.3	-	1432	266aa	ENSSSCP00000044000.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AJD3 A0A4X1W8D2	-
ENSSSCT00000069632.2	-	1398	321aa	ENSSSCP00000066272.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QN07	-

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Summary

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