Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: OPN5 ENSSSCG00000027863

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Description

opsin 5 [Source:VGNC Symbol;Acc:VGNC:91052]

Location

Primary_assembly 7: 42,476,125-42,527,121 forward strand.

Sscrofa11.1:CM000818.5

About this gene

This gene has 2 transcripts (splice variants), 208 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000031870.3	OPN5-202	1134	378aa	ENSSSCP00000027454.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1UZM3 I3LTK7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000071214.2	OPN5-201	1214	353aa	ENSSSCP00000072301.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R7I1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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