Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CEP85 ENSSSCG00000026731

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Description

centrosomal protein 85 [Source:VGNC Symbol;Acc:VGNC:86579]

Location

Primary_assembly 6: 83,651,017-83,686,441 forward strand.

Sscrofa11.1:CM000817.5

About this gene

This gene has 3 transcripts (splice variants), 208 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000022716.4	CEP85-203	4007	760aa	ENSSSCP00000026336.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3LQF6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000046240.2	CEP85-201	8013	146aa	ENSSSCP00000039833.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A781 A0A8D0XAG9	-
ENSSSCT00000057537.3	CEP85-202	3626	709aa	ENSSSCP00000054686.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BED2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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