Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: LIN7C ENSSSCG00000022806

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Description

lin-7 homolog C, crumbs cell polarity complex component [Source:VGNC Symbol;Acc:VGNC:89732]

Location

Primary_assembly 2: 32,845,208-32,856,322 forward strand.

Sscrofa11.1:CM000813.5

About this gene

This gene has 7 transcripts (splice variants), 210 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000093576.1	LIN7C-202	3708	200aa	ENSSSCP00000075559.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FB90	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000099435.1	LIN7C-205	7455	195aa	ENSSSCP00000078893.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FI44	-
ENSSSCT00000022243.3	LIN7C-206	4919	197aa	ENSSSCP00000027907.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0YQY9 F2Z5M5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000083286.1	LIN7C-204	4901	196aa	ENSSSCP00000061549.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QBW9 A0A8D0IIP6	-
ENSSSCT00000067448.2	LIN7C-203	4886	191aa	ENSSSCP00000070487.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R043	-
ENSSSCT00000072257.1	LIN7C-207	4847	173aa	ENSSSCP00000063356.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1SZ20 A0A5G2QHL3	-
ENSSSCT00000060576.2	LIN7C-201	600	199aa	ENSSSCP00000044489.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AKE5 A0A8D1GP87	-

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Summary

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