Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: HGD ENSSSCG00000021227

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Description

homogentisate 1,2-dioxygenase [Source:VGNC Symbol;Acc:VGNC:88868]

Location

Primary_assembly 13: 139,660,343-139,710,404 forward strand.

Sscrofa11.1:CM000824.5

About this gene

This gene has 4 transcripts (splice variants) and 203 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000083522.2	HGD-202	1664	453aa	ENSSSCP00000066841.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1T6Y2 A0A5G2QQ42	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000049674.3	HGD-204	1715	445aa	ENSSSCP00000043976.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AJB1 A0A4X1T402	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000029368.4	HGD-203	1600	416aa	ENSSSCP00000027592.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1T592 I3LTZ3	-
ENSSSCT00000079551.2	HGD-201	1552	450aa	ENSSSCP00000060884.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2Q9B8	-

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Summary

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