Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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ID History
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Gene: BSCL2 ENSSSCG00000020823

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Description

BSCL2 lipid droplet biosis associated, seipin [Source:VGNC Symbol;Acc:VGNC:85891]

Location

Primary_assembly 2: 9,052,070-9,064,886 forward strand.

Sscrofa11.1:CM000813.5

About this gene

This gene has 5 transcripts (splice variants) and 235 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000025488.4	BSCL2-205	2147	465aa	ENSSSCP00000021622.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3LC49	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000057466.3	BSCL2-203	1745	460aa	ENSSSCP00000058339.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BDR0	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000055749.3	BSCL2-204	1607	414aa	ENSSSCP00000050112.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B1Z9	-
ENSSSCT00000061218.2	BSCL2-201	1589	379aa	ENSSSCP00000056622.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BJR6	-
ENSSSCT00000093044.1	BSCL2-202	1336	352aa	ENSSSCP00000080010.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FNX6	-

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Summary

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