Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CALCOCO2 ENSSSCG00000017543

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Description

calcium binding and coiled-coil domain 2 [Source:VGNC Symbol;Acc:VGNC:86141]

Location

Primary_assembly 12: 25,050,081-25,088,895 forward strand.

Sscrofa11.1:CM000823.5

About this gene

This gene has 3 transcripts (splice variants), 203 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000079098.2	CALCOCO2-201	2404	501aa	ENSSSCP00000062512.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QKC1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000019097.5	CALCOCO2-202	2232	424aa	ENSSSCP00000018591.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RWF7	-
ENSSSCT00000080801.2	CALCOCO2-203	2193	433aa	ENSSSCP00000067388.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QZL4	-

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Summary

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