Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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  - Gene tree
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Gene: RAD17 ENSSSCG00000016960

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Description

RAD17 checkpoint clamp loader component [Source:VGNC Symbol;Acc:VGNC:92052]

Location

Primary_assembly 16: 47,499,669-47,529,702 forward strand.

Sscrofa11.1:CM000827.5

About this gene

This gene has 3 transcripts (splice variants) and 200 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000039928.2	RAD17-203	2855	711aa	ENSSSCP00000059002.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BR55 A0A8D0ZML9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000018469.4	RAD17-201	2872	685aa	ENSSSCP00000017969.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1IR52 F1SKR7	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000023550.2	RAD17-202	2547	661aa	ENSSSCP00000020484.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0ZRQ5 I3L8X3	-

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Summary

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