Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ITGA1 ENSSSCG00000016885

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Description

integrin subunit alpha 1 [Source:VGNC Symbol;Acc:VGNC:89231]

Location

Primary_assembly 16: 32,129,612-32,304,592 forward strand.

Sscrofa11.1:CM000827.5

About this gene

This gene has 4 transcripts (splice variants), 231 orthologues and 17 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000082027.1	ITGA1-204	4986	1175aa	ENSSSCP00000066771.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R836	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000092839.1	ITGA1-203	4145	1142aa	ENSSSCP00000080756.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FMN7	-
ENSSSCT00000018389.3	ITGA1-202	3456	1151aa	ENSSSCP00000017893.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1SMF6	-
ENSSSCT00000088837.1	ITGA1-201	3423	1140aa	ENSSSCP00000073887.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RG33	-

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Summary

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