Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SLC13A1 ENSSSCG00000016609

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Description

solute carrier family 13 member 1 [Source:VGNC Symbol;Acc:VGNC:92929]

Location

Primary_assembly 18: 24,011,108-24,219,235 forward strand.

Sscrofa11.1:CM000829.5

About this gene

This gene has 6 transcripts (splice variants), 212 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000054622.2	SLC13A1-202	2957	594aa	ENSSSCP00000048334.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AWR1 A0A8D1K5K2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000070999.2	SLC13A1-203	2903	577aa	ENSSSCP00000062265.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A480L086 A0A8D1T213	-
ENSSSCT00000088903.1	SLC13A1-204	2708	554aa	ENSSSCP00000072669.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R6G4 A0A8D1N504	-
ENSSSCT00000018083.4	SLC13A1-205	2509	542aa	ENSSSCP00000017594.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1TJW7 F1SLX9	-
ENSSSCT00000081870.2	SLC13A1-206	2258	541aa	ENSSSCP00000074530.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RB17 A0A8D1JHV9	-
ENSSSCT00000065469.3	SLC13A1-201	561	175aa	ENSSSCP00000034243.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZRI7	-

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Summary

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