Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Gene: POT1 ENSSSCG00000016597

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Description

protection of telomeres 1 [Source:VGNC Symbol;Acc:VGNC:104032]

Location

Primary_assembly 18: 22,885,749-22,981,890 forward strand.

Sscrofa11.1:CM000829.5

About this gene

This gene has 4 transcripts (splice variants) and 210 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000050143.2	POT1-204	5831	784aa	ENSSSCP00000039399.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A5Z9 A0A8D0MUL6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000047604.2	POT1-201	3433	758aa	ENSSSCP00000042654.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AFN7 A0A8D1ZCU6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000078344.1	POT1-203	3368	732aa	ENSSSCP00000069524.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QX58 A0A8D0MSQ9	-
ENSSSCT00000083781.1	POT1-202	3331	722aa	ENSSSCP00000061922.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QE40 A0A8D2CBQ6	-

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Summary

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