Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: RAB17 ENSSSCG00000016328

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Description

RAB17, member RAS onco family [Source:VGNC Symbol;Acc:VGNC:98240]

Location

Primary_assembly 15: 137,235,936-137,261,057 reverse strand.

Sscrofa11.1:CM000826.5

About this gene

This gene has 3 transcripts (splice variants), 147 orthologues and 65 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000039314.3	RAB17-202	2654	217aa	ENSSSCP00000050183.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B1S1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000067648.2	RAB17-201	1659	214aa	ENSSSCP00000072719.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R6L3 A0A8D1KTR0	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000080107.1	RAB17-203	1609	216aa	ENSSSCP00000063170.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QH68 A0A8D0SS06	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Summary

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